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1

A physical and genetic map of Cannabis sativa identifies extensive rearrangement at the THC/CBD acid synthase locus

Laverty, Kaitlin U, Stout, Jake M, Sullivan, Mitchell J, Shah, Hardik, Gill, Navdeep, Holbrook, Larry, Deikus, Gintaras, Sebra, Robert, Hughes, Timothy R, Page, Jonathan E, van Bakel, Harm

Journal:

Genome Research

Year:

2018

Language:

english

File:

PDF, 1.22 MB

english, 2018

2

Single molecule-level detection and long read-based phasing of epigenetic variations in bacterial methylomes

Beaulaurier, John, Zhang, Xue-Song, Zhu, Shijia, Sebra, Robert, Rosenbluh, Chaggai, Deikus, Gintaras, Shen, Nan, Munera, Diana, Waldor, Matthew K., Chess, Andrew, Blaser, Martin J., Schadt, Eric E., F

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 1008 KB

english, 2015

3

A hybrid approach for the automated finishing of bacterial genomes

Bashir, Ali, Klammer, Aaron A, Robins, William P, Chin, Chen-Shan, Webster, Dale, Paxinos, Ellen, Hsu, David, Ashby, Meredith, Wang, Susana, Peluso, Paul, Sebra, Robert, Sorenson, Jon, Bullard, James,

Journal:

Nature Biotechnology

Year:

2012

Language:

english

File:

PDF, 2.02 MB

english, 2012

4

The Architecture of a Scrambled Genome Reveals Massive Levels of Genomic Rearrangement during Development

Chen, Xiao, Bracht, John R., Goldman, Aaron David, Dolzhenko, Egor, Clay, Derek M., Swart, Estienne C., Perlman, David H., Doak, Thomas G., Stuart, Andrew, Amemiya, Chris T., Sebra, Robert P., Landweb

Journal:

Year:

2014

Language:

english

File:

PDF, 1.14 MB

english, 2014

5

Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing

Mathers, Amy J., Stoesser, Nicole, Sheppard, Anna E., Pankhurst, Louise, Giess, Adam, Yeh, Anthony J., Didelot, Xavier, Turner, Stephen D., Sebra, Robert, Kasarskis, Andrew, Peto, Tim, Crook, Derrick,

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2015

Language:

english

File:

PDF, 1.03 MB

english, 2015

6

Assembly and diploid architecture of an individual human genome via single-molecule technologies

Pendleton, Matthew, Sebra, Robert, Pang, Andy Wing Chun, Ummat, Ajay, Franzen, Oscar, Rausch, Tobias, Stütz, Adrian M, Stedman, William, Anantharaman, Thomas, Hastie, Alex, Dai, Heng, Fritz, Markus Hs

Journal:

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

7

Metagenomic binning and association of plasmids with bacterial host genomes using DNA methylation

Beaulaurier, John, Zhu, Shijia, Deikus, Gintaras, Mogno, Ilaria, Zhang, Xue-Song, Davis-Richardson, Austin, Canepa, Ronald, Triplett, Eric W, Faith, Jeremiah J, Sebra, Robert, Schadt, Eric E, Fang, Ga

Journal:

Nature Biotechnology

Year:

2017

Language:

english

File:

PDF, 1.84 MB

english, 2017

8

Coupling of Single Molecule, Long Read Sequencing with IMGT/HighV-QUEST Analysis Expedites Identification of SIV gp140-Specific Antibodies from scFv Phage Display Libraries

Han, Seung Yub, Antoine, Alesia, Howard, David, Chang, Bryant, Chang, Woo Sung, Slein, Matthew, Deikus, Gintaras, Kossida, Sofia, Duroux, Patrice, Lefranc, Marie-Paule, Sebra, Robert P., Smith, Meliss

Journal:

Frontiers in Immunology

Year:

2018

Language:

english

File:

PDF, 2.66 MB

english, 2018

9

Identification of a DNA N6-Adenine Methyltransferase Complex and Its Impact on Chromatin Organization

Beh, Leslie Y., Debelouchina, Galia T., Clay, Derek M., Thompson, Robert E., Lindblad, Kelsi A., Hutton, Elizabeth R., Bracht, John R., Sebra, Robert P., Muir, Tom W., Landweber, Laura F.

Journal:

Year:

2019

Language:

english

File:

PDF, 5.86 MB

english, 2019

10

Reprioritization of biofilm metabolism is associated with nutrient adaptation and long-term survival of Haemophilus influenzae

Harrison, Alistair, Hardison, Rachael L., Wallace, Rachel M., Fitch, James, Heimlich, Derek R., Bryan, Meghan O’, Dubois, Laura, John-Williams, Lisa St., Sebra, Robert P., White, Peter, Moseley, M. Ar

Journal:

npj Biofilms and Microbiomes

Year:

2019

File:

PDF, 1.97 MB

2019

11

ORF Capture-Seq as a versatile method for targeted identification of full-length isoforms

Sheynkman, Gloria M., Tuttle, Katharine S., Laval, Florent, Tseng, Elizabeth, Underwood, Jason G., Yu, Liang, Dong, Da, Smith, Melissa L., Sebra, Robert, Willems, Luc, Hao, Tong, Calderwood, Michael A

Journal:

Nature Communications

Year:

2020

File:

PDF, 978 KB

2020

12

Quantifying Polymer Swelling Employing a Linear Variable Differential Transformer: CO2 Effects on SBS Triblock Copolymer

Suresh Shenoy, Dara Woerdeman, Robert Sebra, Alberto Garach-Domech, Kenneth J. Wynne

Journal:

Macromolecular Rapid Communications

Year:

2002

Language:

english

File:

PDF, 110 KB

english, 2002

13

Controlled polymerization chemistry to graft architectures that influence cell-material interactions

Robert P. Sebra, Sirish K. Reddy, Kristyn S. Masters, Christopher N. Bowman, Kristi S. Anseth

Journal:

Acta Biomaterialia

Year:

2007

Language:

english

File:

PDF, 1004 KB

english, 2007

14

3D polymeric microfluidic device fabrication via contact liquid photolithographic polymerization (CLiPP)

K. Tommy Haraldsson, J. Brian Hutchison, Robert P. Sebra, Brian T. Good, Kristi S. Anseth, Christopher N. Bowman

Journal:

Sensors and Actuators B: Chemical

Year:

2006

Language:

english

File:

PDF, 303 KB

english, 2006

15

Living radical photopolymerization induced grafting on thiol–ene based substrates

Sirish K. Reddy, Robert P. Sebra, Kristi S. Anseth, Christopher N. Bowman

Journal:

Journal of Polymer Science Part A: Polymer Chemistry

Year:

2005

Language:

english

File:

PDF, 274 KB

english, 2005

16

Integrated surface modification of fully polymeric microfluidic devices using living radical photopolymerization chemistry

Robert P. Sebra, Kristi S. Anseth, Christopher N. Bowman

Journal:

Journal of Polymer Science Part A: Polymer Chemistry

Year:

2006

Language:

english

File:

PDF, 263 KB

english, 2006

17

Synthesis and photografting of highly pH-responsive polymer chains

Robert P. Sebra, Andrea M. Kasko, Kristi S. Anseth, Christopher N. Bowman

Journal:

Sensors and Actuators B: Chemical

Year:

2006

Language:

english

File:

PDF, 466 KB

english, 2006

18

Robust polymer microfluidic device fabrication via contact liquid photolithographic polymerization (CLiPP)

Hutchison, J. Brian, Haraldsson, K. Tommy, Good, Brian T., Sebra, Robert P., Luo, Ning, Anseth, Kristi S., Bowman, Christopher N.

Journal:

Year:

2004

Language:

english

File:

PDF, 508 KB

english, 2004

19

Origins of the E. coli Strain Causing an Outbreak of Hemolytic–Uremic Syndrome in Germany

Rasko, David A., Webster, Dale R., Sahl, Jason W., Bashir, Ali, Boisen, Nadia, Scheutz, Flemming, Paxinos, Ellen E., Sebra, Robert, Chin, Chen-Shan, Iliopoulos, Dimitris, Klammer, Aaron, Peluso, Paul,

Journal:

Boston Medical and Surgical Journal

Year:

2011

Language:

english

File:

PDF, 915 KB

english, 2011

20

HIV-1 Interacts with Human Endogenous Retrovirus K (HML-2) Envelopes Derived from Human Primary Lymphocytes

Brinzevich, D., Young, G. R., Sebra, R., Ayllon, J., Maio, S. M., Deikus, G., Chen, B. K., Fernandez-Sesma, A., Simon, V., Mulder, L. C. F.

Journal:

Journal of Virology

Year:

2014

Language:

english

File:

PDF, 2.71 MB

english, 2014

21

Detection of Antigens in Biologically Complex Fluids with Photografted Whole Antibodies

Sebra, Robert P., Masters, Kristyn S., Cheung, Charles Y., Bowman, Christopher N., Anseth, Kristi S.

Journal:

Analytical Chemistry

Year:

2006

Language:

english

File:

PDF, 245 KB

english, 2006

22

Transmission of Methicillin-Resistant Staphylococcus aureus via Deceased Donor Liver Transplantation Confirmed by Whole Genome Sequencing

Altman, D. R., Sebra, R., Hand, J., Attie, O., Deikus, G., Carpini, K. W. D., Patel, G., Rana, M., Arvelakis, A., Grewal, P., Dutta, J., Rose, H., Shopsin, B., Daefler, S., Schadt, E., Kasarskis, A.,

Journal:

American Journal of Transplantation

Year:

2014

Language:

english

File:

PDF, 96 KB

english, 2014

23

Surface Grafted Antibodies: Controlled Architecture Permits Enhanced Antigen Detection

Sebra, Robert P., Masters, Kristyn S., Bowman, Christopher N., Anseth, Kristi S.

Journal:

Year:

2005

Language:

english

File:

PDF, 368 KB

english, 2005

24

Evolution of hypervirulence by a MRSA clone through acquisition of a transposable element

Benson, Meredith A., Ohneck, Elizabeth A., Ryan, Chanelle, Alonzo, Francis, Smith, Hannah, Narechania, Apurva, Kolokotronis, Sergios-Orestis, Satola, Sarah W., Uhlemann, Anne-Catrin, Sebra, Robert, De

Journal:

Molecular Microbiology

Year:

2014

Language:

english

File:

PDF, 1.91 MB

english, 2014

25

Quantitative and multiplexed DNA methylation analysis using long-read single-molecule real-time bisulfite sequencing (SMRT-BS)

Yang, Yao, Sebra, Robert, Pullman, Benjamin S, Qiao, Wanqiong, Peter, Inga, Desnick, Robert J, Geyer, C Ronald, DeCoteau, John F, Scott, Stuart A

Journal:

Year:

2015

Language:

english

File:

PDF, 1.88 MB

english, 2015

26

Characterizing and Overriding the Structural Mechanism of the Quizartinib-Resistant FLT3 "Gatekeeper" F691L Mutation with PLX3397

Smith, C. C., Zhang, C., Lin, K. C., Lasater, E. A., Zhang, Y., Massi, E., Damon, L. E., Pendleton, M., Bashir, A., Sebra, R., Perl, A., Kasarskis, A., Shellooe, R., Tsang, G., Carias, H., Powell, B.,

Journal:

Cancer Discovery

Year:

2015

Language:

english

File:

PDF, 1.73 MB

english, 2015

27

Whole-genome sequencing identifies emergence of a quinolone resistance mutation in a case of Stenotrophomonas maltophilia bacteremia

Pak, Theodore R., Altman, Deena R., Attie, Oliver, Sebra, Robert, Hamula, Camille L., Lewis, Martha, Deikus, Gintaras, Newman, Leah C., Fang, Gang, Hand, Jonathan, Patel, Gopi, Wallach, Fran, Schadt,

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2015

Language:

english

File:

PDF, 720 KB

english, 2015

28

Genome Sequencing of an Extended Series of NDM-Producing Klebsiella pneumoniae Isolates from Neonatal Infections in a Nepali Hospital Characterizes the Extent of Community- versus Hospital-Associated Transmission in an Endemic Setting

Stoesser, N., Giess, A., Batty, E. M., Sheppard, A. E., Walker, A. S., Wilson, D. J., Didelot, X., Bashir, A., Sebra, R., Kasarskis, A., Sthapit, B., Shakya, M., Kelly, D., Pollard, A. J., Peto, T. E.

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2014

Language:

english

File:

PDF, 3.35 MB

english, 2014

29

Genome Sequence of Bacterial Interference Strain Staphylococcus aureus 502A

Parker, D., Narechania, A., Sebra, R., Deikus, G., LaRussa, S., Ryan, C., Smith, H., Prince, A., Mathema, B., Ratner, A. J., Kreiswirth, B., Planet, P. J.

Journal:

Genome Announcements

Year:

2014

Language:

english

File:

PDF, 131 KB

english, 2014

30

Intrahost Dynamics of Antiviral Resistance in Influenza A Virus Reflect Complex Patterns of Segment Linkage, Reassortment, and Natural Selection

Rogers, Matthew B., Song, Timothy, Sebra, Robert, Greenbaum, Benjamin D., Hamelin, Marie-Eve, Fitch, Adam, Twaddle, Alan, Cui, Lijia, Holmes, Edward C., Boivin, Guy, Ghedin, Elodie

Journal:

Year:

2015

Language:

english

File:

PDF, 409 KB

english, 2015

31

Quantifying influenza virus diversity and transmission in humans

Poon, Leo L M, Song, Timothy, Rosenfeld, Roni, Lin, Xudong, Rogers, Matthew B, Zhou, Bin, Sebra, Robert, Halpin, Rebecca A, Guan, Yi, Twaddle, Alan, DePasse, Jay V, Stockwell, Timothy B, Wentworth, Da

Journal:

Nature Genetics

Year:

2016

Language:

english

File:

PDF, 1.16 MB

english, 2016

32

Complete Genome Sequence of KPC-Producing Klebsiella pneumoniae Strain CAV1193

Sheppard, Anna E., Stoesser, Nicole, Sebra, Robert, Kasarskis, Andrew, Deikus, Gintaras, Anson, Luke, Walker, A. Sarah, Peto, Tim E., Crook, Derrick W., Mathers, Amy J.

Journal:

Genome Announcements

Year:

2016

Language:

english

File:

PDF, 154 KB

english, 2016

33

Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131

Stoesser, Nicole, Sheppard, Anna E., Pankhurst, Louise, De Maio, Nicola, Moore, Catrin E., Sebra, Robert, Turner, Paul, Anson, Luke W., Kasarskis, Andrew, Batty, Elizabeth M., Kos, Veronica, Wilson, D

Journal:

Year:

2016

File:

PDF, 5.54 MB

2016

34

Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131

Stoesser, Nicole, Sheppard, Anna E., Pankhurst, Louise, De Maio, Nicola, Moore, Catrin E., Sebra, Robert, Turner, Paul, Anson, Luke W., Kasarskis, Andrew, Batty, Elizabeth M., Kos, Veronica, Wilson, D

Journal:

Year:

2016

Language:

english

File:

PDF, 5.54 MB

english, 2016

35

Nested Russian Doll-Like Genetic Mobility Drives Rapid Dissemination of the Carbapenem Resistance Gene bla KPC

Sheppard, Anna E., Stoesser, Nicole, Wilson, Daniel J., Sebra, Robert, Kasarskis, Andrew, Anson, Luke W., Giess, Adam, Pankhurst, Louise J., Vaughan, Alison, Grim, Christopher J., Cox, Heather L., Yeh

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2016

Language:

english

File:

PDF, 857 KB

english, 2016

36

SPIE Proceedings [SPIE MOEMS-MEMS 2008 Micro and Nanofabrication - San Jose, CA (Saturday 19 January 2008)] Micromachining and Microfabrication Process Technology XIII - Advances in the fabrication of surface modified microfluidic devices in nonfluorescing UV cured materials

Watts, M. P. C., Maher, Mary-Ann, Chiao, Jung-Chih, Cramer, N., Sebra, R., Resnick, Paul J., Simms, H., Masters, K., Haraldsson, T., Anseth, K., Bowman, C.

Year:

2008

Language:

english

File:

PDF, 1.98 MB

english, 2008

37

The Complete Genome Sequence of the Emerging Pathogen Mycobacterium haemophilum Explains Its Unique Culture Requirements

Tufariello, J. M., Kerantzas, C. A., Vilcheze, C., Calder, R. B., Nordberg, E. K., Fischer, J. A., Hartman, T. E., Yang, E., Driscoll, T., Cole, L. E., Sebra, R., Maqbool, S. B., Wattam, A. R., Jacobs

Journal:

Year:

2015

Language:

english

File:

PDF, 2.88 MB

english, 2015

38

Long-Read Single Molecule Real-Time Full Gene Sequencing of Cytochrome P450-2D6

Qiao, Wanqiong, Yang, Yao, Sebra, Robert, Mendiratta, Geetu, Gaedigk, Andrea, Desnick, Robert J., Scott, Stuart A.

Journal:

Year:

2016

Language:

english

File:

PDF, 536 KB

english, 2016

39

A Perinatal Loss Follow-up Guide For Primary Care

EWTON, DARLENE SEBRA

Journal:

The Nurse Practitioner

Year:

1993

File:

PDF, 651 KB

1993

40

First Report of bla IMP-14 on a Plasmid Harboring Multiple Drug Resistance Genes in Escherichia coli Sequence Type 131

Stoesser, Nicole, Sheppard, Anna E., Peirano, Gisele, Sebra, Robert P., Lynch, Tarah, Anson, Luke W., Kasarskis, Andrew, Motyl, Mary R., Crook, Derrick W., Pitout, Johann D.

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2016

Language:

english

File:

PDF, 1.49 MB

english, 2016

41

Complete sequencing of plasmids containing bla OXA-163 and bla OXA-48 in Escherichia coli ST131

Stoesser, Nicole, Sheppard, Anna E, Peirano, Gisele, Sebra, Robert, Lynch, Tarah, Anson, Luke, Kasarskis, Andrew, Motyl, Mary R., Crook, Derrick W, Pitout, Johann D

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2016

Language:

english

File:

PDF, 1.09 MB

english, 2016

42

A pre-operative, diagnostic gene panel for guiding primary treatment choices in endometrial cancer: Advancing beyond the decades-old technology of dilation and curettage (D&C)

Martignetti, J., Reva, B., Elena, P., Camacho-Vanegas, O., Rykunov, D., Kendall, S., Shah, H., Nair, N., Strahl, M., Hamou, W., Kalir, T., Schadt, E., Sebra, R., Dottino, P.

Journal:

European Journal of Cancer

Year:

2016

Language:

english

File:

PDF, 57 KB

english, 2016

43

Personalized circulating tumor DNA biomarkers dynamically predict treatment response and survival in gynecologic cancers

Pereira, E., Vanegas, O.C., Anand, S., Sebra, R., Vanegas, S.C.C., Garnar-Wortzel, L., Nair, N., Moshier, E.L., Wooten, M., Uzilov, A., Chen, R., Hayes, M.P., Zakashansky, K., Beddoe, A.M., Schadt, E.

Journal:

Gynecologic Oncology

Year:

2016

Language:

english

File:

PDF, 150 KB

english, 2016

44

Genome-wide biases in the rate and molecular spectrum of spontaneous mutations in Vibrio cholerae and Vibrio fischeri

Dillon, Marcus M., Sung, Way, Sebra, Robert, Lynch, Michael, Cooper, Vaughn S.

Journal:

Molecular Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 2.00 MB

english, 2016

45

Capturing pairwise and multi-way chromosomal conformations using chromosomal walks

Olivares-Chauvet, Pedro, Mukamel, Zohar, Lifshitz, Aviezer, Schwartzman, Omer, Elkayam, Noa Oded, Lubling, Yaniv, Deikus, Gintaras, Sebra, Robert P., Tanay, Amos

Journal:

Year:

2016

Language:

english

File:

PDF, 28.99 MB

english, 2016

46

Chromosomal Integration of the Klebsiella pneumoniae Carbapenemase Gene, bla KPC , in Klebsiella Species Is Elusive but Not Rare

Mathers, Amy J., Stoesser, Nicole, Chai, Weidong, Carroll, Joanne, Barry, Katie, Cherunvanky, Anita, Sebra, Robert, Kasarskis, Andrew, Peto, Tim E., Walker, A. Sarah, Sifri, Costi D., Crook, Derrick W

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2017

Language:

english

File:

PDF, 1.48 MB

english, 2017

47

Use of Multiple Sequencing Technologies To Produce a High-Quality Genome of the Fungus Pseudogymnoascus destructans , the Causative Agent of Bat White-Nose Syndrome

Drees, Kevin P., Palmer, Jonathan M., Sebra, Robert, Lorch, Jeffrey M., Chen, Cynthia, Wu, Cheng-Cang, Bok, Jin Woo, Keller, Nancy P., Blehert, David S., Cuomo, Christina A., Lindner, Daniel L., Foste

Journal:

Genome Announcements

Year:

2016

Language:

english

File:

PDF, 192 KB

english, 2016

48

Synthesis, characterization and electrochemical properties of poly(phenoxy-imine)s containing carbazole unit

Kaya, İsmet, Çöpür, Sebra, Karaer, Hatice

Journal:

International Journal of Industrial Chemistry

Year:

2017

Language:

english

File:

PDF, 4.01 MB

english, 2017

49

Emergence and Evolution of Multidrug-Resistant Klebsiella pneumoniae with both bla KPC and bla CTX-M Integrated in Chromosome

Huang, Weihua, Wang, Guiqing, Sebra, Robert, Zhuge, Jian, Yin, Changhong, Aguero-Rosenfeld, Maria E., Schuetz, Audrey N., Dimitrova, Nevenka, Fallon, John T.

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2017

Language:

english

File:

PDF, 4.34 MB

english, 2017

50

Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR + Populations with Stem Cell Properties

Tome-Garcia, Jessica, Tejero, Rut, Nudelman, German, Yong, Raymund L., Sebra, Robert, Wang, Huaien, Fowkes, Mary, Magid, Margret, Walsh, Martin, Silva-Vargas, Violeta, Zaslavsky, Elena, Friedel, Rolan

Journal:

Stem Cell Reports

Year:

2017

Language:

english

File:

PDF, 3.43 MB

english, 2017

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